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Abstracts tagged "Genomics and Proteomics"

  • Abstract Number: 0874 • ACR Convergence 2023

    RNA-Binding Proteins That Are Highly Expressed and Enriched in Healthy Cartilage but Suppressed in Osteoarthritis

    Hannah Swahn, Merissa Olmer and Martin K Lotz, Scripps Research Institute, La Jolla, CA

    Background/Purpose: RNA-binding proteins (RBPs) have diverse and essential biological functions, but their role in cartilage health and disease is largely unknown. The objectives of this…
  • Abstract Number: 1595 • ACR Convergence 2023

    Pharmacological Modulation of Krüppel-like Factor 4 Reduces the Severity of Experimental Osteoarthritis via Tissue Protection and Regeneration

    Manabu Kawata1, Merissa Olmer2, Kristen Johnson3 and Martin K Lotz2, 1Scripps Research Institute, San Diego, CA, 2Scripps Research Institute, La Jolla, CA, 3CALIBR, La Jolla, CA

    Background/Purpose: Krüppel-like factors (KLFs) are members of the zinc finger family of transcription factors, which includes 17 members in mammals. We found that expression of…
  • Abstract Number: 1644 • ACR Convergence 2023

    The EISER Study: Identifying Microbial Factors Associated with Subclinical Gut Inflammation in Spondyloarthritis Patients

    Alba Boix-Amorós1, Rebecca Blank2, Adam Cantor1, Jesus Sanz3, Ana Gutiérrez-Casbas4, Jordi Gratacos Masmitja5, Iago Rodríguez -Lago6, Elisa Trujillo7, Ignacio Marin-Jimenez8, Zulema Plaza9, Marta Domínguez10, Jose Federico Diaz-Gonzalez11, Juan D Canete12, Jose Scher13 and Jose Clemente1, 1Icahn School of Medicine, New York, NY, 2New York University, New York, NY, 3Hospital Universitario Puerta de Hierro, Majadahonda, Spain, 4Hospital General Universitario Dr. Balmis, Alicante, Spain, 5University Hospital Parc Taulí, Sabadell, Spain, 6Gastroenterology department Hospital Galdakao, Galdakao, Spain, 7Hospital Universitario de Canarias, Santa Cruz de Tenerife, Spain, 8Public Health System, Madrid, Spain, 9Universidad Autónoma de Madrid, Madrid, Spain, 10Sociedad Española de Reumatología, Madrid, Spain, 11Hospital Universitario de Canarias, La Laguna, Spain, 12Hospital Clinic an IDIBAPS, Barcelona, Spain, 13New York University School of Medicine, New York, NY

    Background/Purpose: Nearly 8% of patients with spondyloarthritis (SpA) manifest symptoms that are compatible with active inflammatory bowel disease (IBD), despite not having any previous diagnosis…
  • Abstract Number: 1657 • ACR Convergence 2023

    Mapping the Network of Coordinated Immune Dysregulation in Juvenile Dermatomyositis at Single-cell Resolution

    Gabrielle Rabadam1, Camilla Wibrand2, Emily Flynn1, George Hartoularos1, Yang Sun1, Susan Kim3, Chun Jimmie Ye1, Zev Gartner1, Marina Sirota4 and Jessica Neely1, 1University of California San Francisco, San Francisco, CA, 2Aarhus University, Aarhus, Denmark, and University of California San Francisco, San Francisco, CA, 3UCSF Benioff Children's Hospital, San Francisco, CA, 4Bakar Computational Health Sciences Institute, University of California San Francisco, San Francisco, CA

    Background/Purpose: Juvenile Dermatomyositis (JDM) is a rare multisystem autoimmune condition that involves complex immune responses in both innate and adaptive compartments. Currently, we have a…
  • Abstract Number: 004 • 2023 Pediatric Rheumatology Symposium

    Analysis of Patients with Juvenile Dermatomyositis Compared to Healthy Controls Using CITE-seq Identifies Differences in Cell Composition and Gene and Epitope Expression

    Camilla Wibrand1, Emily Flynn2, Gabrielle Rabadam2, George Hartoularos2, Yang Sun2, Chun Ye2, Susan Kim3, Marina Sirota2 and Jessica Neely1, 1UCSF, San Francisco, CA, 2University of California, San Francisco, San Francisco, CA, 3UCSF Benioff Children's Hospital, San Francisco, CA

    Background/Purpose: Juvenile dermatomyositis (JDM) is a rare and serious systemic autoimmune condition, and much remains unknown about the pathogenesis, the immune cell types and cell-specific…
  • Abstract Number: 0563 • ACR Convergence 2022

    High-Dimensional Immunophenotyping with Mass Cytometry Reveals Unique Immune Cell Aberrations in Patients with Undiagnosed Inflammatory and Autoimmune Diseases

    Alisa Mueller1, Takanori Sasaki2, Joshua Keegan1, Jennifer Nguyen1, Alec Griffith1, Elizabeth Feig1, Alice Horisberger3, Ye Cao1, Gregory Keras1, Lauren Briere4, Laurel Cobban1, Daimon Simmons1, Juan Pallais1, Jeffrey Sparks2, V. Michael Holers5, Undiagnosed Diseases Network1, David Sweetser4, Joel Krier1, Joseph Loscalzo1, James Lederer1 and Deepak Rao1, 1Brigham and Women's Hospital, Boston, MA, 2Brigham and Women's Hospital and Harvard Medical School, Boston, MA, 3Harvard Medical School and Lausanne University Hospital, Boston, MA, 4Massachusetts General Hospital, Boston, MA, 5University of Colorado, Denver, CO

    Background/Purpose: Few tools are available to evaluate the immune dysregulation in patients with severe autoimmune or inflammatory conditions that do not conform to well-defined rheumatologic…
  • Abstract Number: 0602 • ACR Convergence 2022

    Cellworks Biosimulation Model (CBM) for Rheumatoid Arthritis (RA), Accurately Captures Patient’s Disease Activity at the Molecular Level Using Their Omics Data and Can Bring Personalization to Treatment Selection in RA

    Himanshu Grover1, Ansu Kumar1, Anushua Chakraborty1, Susheel George Chandy1, Vivek Patil1, Swati Khandelwal1, Vishwas Joseph1, Deepak Anil Lala1, Prashant Ramachandran Nair1, Karthik Sundara Raju1, Kunal Ghosh Roy1, Shahabuddin Usmani1, Aftab Alam1, Swaminathan Rajagopalan1, Yatin Mundkur1 and Andrew Concoff2, 1Cellworks Group Inc., South San Francisco, CA, 2United Rheumatology, Hauppauge, NY

    Background/Purpose: Patients with RA demonstrate varied individual responses to the many treatment options available. In the absence of accurate, precision prediction of medication response, current…
  • Abstract Number: 0632 • ACR Convergence 2022

    Single-cell Multiomic Profiling Differentiates Ancestral B Cell Pathologies Contributing to Lupus Disease Activity

    Kevin Thomas, Miles Smith, Samantha Slight-Webb, Susan Macwana, Joseph Kheir, Carla J. Guthridge, Wade deJager, Christian Wright, Bolanle Adebayo, Judith James and Joel Guthridge, Oklahoma Medical Research Foundation, Oklahoma City, OK

    Background/Purpose: Genetic ancestry impacts SLE prevalence, clinical presentation, and treatment response; however, the molecular underpinnings of this disparity remain poorly understood. Recent findings demonstrate that…
  • Abstract Number: 1087 • ACR Convergence 2022

    Identification of Novel Proteomic Biomarkers of Disease Activity in ANCA-Associated Vasculitis Using a High Throughput Approach

    Zachary Wallace1, Amit Joshi1, Xiaoqing Fu1, Claire Cook1, yuqing zhang2 and Hyon Choi3, 1Massachusetts General Hospital, Boston, MA, 2Massachusetts General Hospital, Quincy, MA, 3MASSACHUSETTS GENERAL HOSPITAL, Lexington, MA

    Background/Purpose: ANCA-associated vasculitis (AAV) is associated with excess morbidity and mortality. Identifying novel biomarkers may reveal new therapeutic targets and clinically useful biomarkers of disease…
  • Abstract Number: 1124 • ACR Convergence 2022

    CD4+ Cytotoxic T Lymphocytes (CTL) Are Present in Sjögren’s Disease Minor Salivary Glands and Associate with Markers of Epithelial Cell Damage near Infiltrates

    Michelle Joachims1, Chuang Li1, Joshua Rusbuldt2, Ben Fowler1, Astrid Rasmussen1, Kiely Grundahl1, R. Hal Scofield3, Kathy Sivils4, Christopher Lessard1 and A. Darise Farris1, 1Oklahoma Medical Research Foundation, Oklahoma City, OK, 2Janssen Pharmaceutical Companies of Johnson & Johnson, Spring House, PA, 3University of Oklahoma Health Sciences Center, Oklahoma City, OK, 4Janssen Research and Development, LLC, Spring House, PA

    Background/Purpose: CD4+ T cells dominate focal lymphocytic infiltrates in Sjögren's disease (SjD), but their differentiation states have remained unclear. Here, we used single cell (sc)RNAseq…
  • Abstract Number: 1125 • ACR Convergence 2022

    Genomics of JAK-STAT Signaling in Venous Thromboembolism

    Stine R Haysen, Ane Langkilde-Lauesen Nielsen, Per Qvist and Tue Kragstrup, Aarhus University, Aarhus, Denmark

    Background/Purpose: Janus kinase inhibitors (JAKi) have been associated with an increased risk of venous thromboembolism (VTE). This concern limits the use of JAKi-based therapy. Hence,…
  • Abstract Number: 1145 • ACR Convergence 2022

    The Prostate Plays a Role in Serum Urate Levels and the Risk of Gout in Men

    Mariana Urquiaga1, Megan Leask1, Nicholas Sumpter1, Brooke Maxwell2, Sara Lewis2, Eric E. Kelley2 and Tony Merriman3, 1University of Alabama at Birmingham, Birmingham, AL, 2West Virginia University, Morgantown, WV, 3University of Otago, Dunedin, New Zealand

    Background/Purpose: Men have higher serum urate (SU) and increased prevalence of gout compared to pre-menopausal women. Xanthine oxidoreductase (XOR), encoded by the XDH gene, is…
  • Abstract Number: 1585 • ACR Convergence 2022

    Decreased Discontinuation and Switching of B/tsDMARD Therapy in RA Patients When Treatment Is Aligned with a Molecular Signature Response Classifier: An Analysis from the Study to Accelerate Information of Molecular Signatures (AIMS)

    Jeffrey Curtis1, Emelly Rusli2, Lixia Zhang2, Christina Le-Short2, Alix Arnaud2, Johanna Withers3 and Sam Asgarian2, 1University of Alabama at Birmingham, Hoover, AL, 2Scipher Medicine Corporation, Waltham, MA, 3Scipher Medicine Corportaion, Waltham, MA

    Background/Purpose: Rheumatoid arthritis (RA) patients with inadequate response to methotrexate often experience trial-and-error treatment selection due to a lack of guidance from clinical guidelines or…
  • Abstract Number: 1625 • ACR Convergence 2022

    Single Cell and Spatial Transcriptomics Identifies Pathogenic Drivers of Sjogren’s Disease in Humans

    Blake Warner1, Thomas Pranzatelli2, Paola Perez2, Daniel Martin2, Shyh-Ing Jang2, Kalie Dominick2, Eiko Yamada2, Kevin Byrd3, Quinn Easter4, A. Darise Farris5, Christopher Lessard5, Amanda Oliver6, Raquel Bartolome-Casado6, Zohreh Khavandgar1, Sarthak Gupta7, Sarah Teichmann6, Alan Baer8 and John Chiorini2, 1National Institutes of Health, Bethesda, MD, 2NIDCR, Bethesda, MD, 3American Dental Association, Scientific Research Institute, Gaithersburg, MD, 4American Dental Association, Gaithersburg, MD, 5Oklahoma Medical Research Foundation, Oklahoma City, OK, 6Wellcome Sanger Institute, Cambridgeshire, United Kingdom, 7National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS), National Institutes of Health (NIH), Bethesda, MD, 8Johns Hopkins University School of Medicine, Baltimore, MD

    Background/Purpose: Sjogren's Disease(SjD) is a systemic autoimmune disease characterized by exocrine dysfunction. The pathogenesis is incompletely understood, but involves gene-environment interactions leading to infiltration of…
  • Abstract Number: 0040 • ACR Convergence 2022

    Plasma Proteomic Signatures in Juvenile Dermatomyositis Highlight Novel Proteins and a Protein Module That Associate with Skin and Global Disease Activity

    Marianne Kerski1, Celine Berthier1, Alex Tsoi1, Sarah Vandenbergen1, Madison McClune1, Corey Powell1, J. Michelle Kahlenberg1 and Jessica Turnier2, 1University of Michigan, Ann Arbor, MI, 2University of Michigan, Saline, MI

    Background/Purpose: Juvenile dermatomyositis (JDM) patients display heterogenous disease phenotypes and treatment response patterns. Our study used a multiplexed proteomics assay for measurement of 3072 proteins…
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All abstracts accepted to ACR Convergence are under media embargo once the ACR has notified presenters of their abstract’s acceptance. They may be presented at other meetings or published as manuscripts after this time but should not be discussed in non-scholarly venues or outlets. The following embargo policies are strictly enforced by the ACR.

Accepted abstracts are made available to the public online in advance of the meeting and are published in a special online supplement of our scientific journal, Arthritis & Rheumatology. Information contained in those abstracts may not be released until the abstracts appear online. In an exception to the media embargo, academic institutions, private organizations, and companies with products whose value may be influenced by information contained in an abstract may issue a press release to coincide with the availability of an ACR abstract on the ACR website. However, the ACR continues to require that information that goes beyond that contained in the abstract (e.g., discussion of the abstract done as part of editorial news coverage) is under media embargo until 10:00 AM CT on October 25. Journalists with access to embargoed information cannot release articles or editorial news coverage before this time. Editorial news coverage is considered original articles/videos developed by employed journalists to report facts, commentary, and subject matter expert quotes in a narrative form using a variety of sources (e.g., research, announcements, press releases, events, etc.).

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