ACR Meeting Abstracts

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Abstracts tagged "Gene Expression"

  • Abstract Number: 1167 • ACR Convergence 2023

    Transcriptome Analysis of Peripheral Blood Reveals Superiority of the Triple Combination of Baricitinib, Rituximab, and Tacrolimus Therapy (BRT-Tx.) for anti-MDA5 Antibody-positive Dermatomyositis (MDA5-DM)

    Yoshinobu Koyama1, Yoshiharu Sato2, Yu Nakai3 and Moe Tokunaga(Sakamoto)3, 1Japanese Red Cross Okayama Hospital, Okayama, Japan, 2DNA Chip Research Inc, Tokyo, Japan, 3Rheumatology, Center for Autoimmune diseases, Japanese Red Cross Okayama Hospital, Okayama, Japan

    Background/Purpose: MDA5-DM is characterized by high mortality due to rapid progressive ILD. We reported that in MDA-5DM, (1) RIG-1-like receptor signaling is enhanced, (2) antiviral…
  • Abstract Number: 2481 • ACR Convergence 2023

    Pre-pregnancy Gene Expression Signatures Among Women with Rheumatoid Arthritis May Represent Predictive Biomarkers for Subsequent Improvement or Worsening During Pregnancy

    Matthew Wright1, Mette Smed2, Lee Nelson3, Jørn Olsen4, Merete Hetland5, Nicholas Jewell6, Vibeke Zoffmann2 and Damini Jawaheer1, 1Northwestern University, Chicago, IL, 2Juliane Marie Centre, Rigshospitalet, Copenhagen, Denmark, 3Fred Hutchinson Cancer Center, Seattle, WA, 4Aarhus University Hospital, Aarhus, Denmark, 5Copenhagen Center for Arthritis Research, Rigshospitalet, Copenhagen, Denmark, 6London School of Hygiene and Tropical Medicine, London, United Kingdom

    Background/Purpose: Rheumatoid arthritis (RA) can improve naturally during pregnancy in a substantial proportion of women (50-75%), while it may worsen or remain unchanged in others.…
  • Abstract Number: 0037 • ACR Convergence 2023

    New Histological Approach in Spatial Transcriptomics Implicates Glandular Cell Involvement in Pathophysiology of Sjögren’s Disease

    Paulina Czarnota1, Rick Wilbrink2, Bhuwan Khatri1, Anna Stolarczyk1, Cherilyn Pritchett Frazee1, Chuang Li1, Caleb Marlin1, Kyle Wright3, Kandice Tessneer1, Lida Radfar4, Judith James1, Robert Scofield1, Indra Adrianto5, Astrid Rasmussen1, Joel Guthridge1, A. Darise Farris1 and Christopher Lessard1, 1Oklahoma Medical Research Foundation, Oklahoma City, OK, 2University Medical Center Groningen, Groningen, Netherlands, 3University of Oklahoma Health Sciences Center, Oklahoma City, OK, 4University of Oklahoma College of Dentistry, Oklahoma City, OK, 5Henry Ford Health, Detroit, MI

    Background/Purpose: 10X Visium spatial transcriptomics evaluates gene expression in a 50μm tile coordinate of a sectioned tissue, yielding heterogeneous cell sampling. Spatial PCA algorithm was…
  • Abstract Number: 1271 • ACR Convergence 2023

    Upregulation of IFNγ-Response Genes in Monocytes and T Cells Identified by Single-Cell Transcriptomics in Patients with Anti-CCP Antibody-Positive Rheumatoid Arthritis (RA)

    Bong-Ki Hong1, Sungyong You2, Naeun Lee1, Jung Gon Kim3, Kijun Lee4, Ji Hyeon Ju5, Wan-Uk Kim1 and Ho-Youn Kim6, 1The Catholic University of Korea, Seoul, South Korea, 2Cedars-Sinai Medical Center, Los Angeles, CA, 3Inje University Ilsan Paik Hospital, Goyang, South Korea, 4YiPSCELL, Secho, South Korea, 5Division of Rheumatology, Department of Internal Medicine, Seoul St. Mary's Hospital, College of Medicine, The Catholic University of Korea, Seoul, South Korea, 6HoYoun Kim's Clinic for Arthritis Rheumatism, Seoul, South Korea

    Background/Purpose: Recent research has revealed a significant upregulation of IFNγ-related genes in RA patients, though the underlying mechanisms and implications are still unclear. To further…
  • Abstract Number: 2494 • ACR Convergence 2023

    Complement mRNA Expression in Patients with ANCA-associated Glomerulonephritis

    Salem Almaani1, Arnon Arazi2, Huijuan Song3, Pearlly Yan3, Estela Puchulu-Campanella3, Hubao Wang3, Lynn Fussner3, Samir Parikh3 and Brad Rovin3, 1Ohio State University Medical Center, Columbus, OH, 2Broad Institute of MIT and Harvard, Melrose, MA, 3Ohio State University, Columbus, OH

    Background/Purpose: The role of complement in patients with ANCA-associated vasculitis (AAV) has been increasingly appreciated and led to the use of complement system antagonists as…
  • Abstract Number: 0055 • ACR Convergence 2023

    Elevated LINE-1 Expression in SLE Keratinocytes Leads to LINE-1 Reverse Transcriptase-dependent Type I Interferon Responses

    Wenyan Miao1, Daniel Rios1, Mehrnaz Gharaee-Kermani2, Craig Dobry2, Artur Jaroszewicz1, Cedric Arisdakessian1, Enrique Garcia-Rivera1, Nafeeza Hafeez1, Brian Desrosiers1, Jess Floro1, Jared Steranka1, Menachem Fromer1, Dennis Zaller1 and J. Michelle Kahlenberg2, 1Rome Therapeutics, Boston, MA, 2University of Michigan, Ann Arbor, MI

    Background/Purpose: Long Interspersed Element-1 (LINE-1) are retrotransposable DNA elements that make up ~17% of the human genome, and their role in health and disease is…
  • Abstract Number: 1589 • ACR Convergence 2023

    Epigenetic Regulation of DNMT3A by TFEB and DOT1L Through AMPK Signalling Orchestrates the Lysosomal Response of Macrophages During Gout and Clonal Hematopoiesis

    Isidoro Cobo1, Jessica Murillo-Saich2, Mohnish Alishala1, Stephen Calderon1, Roxana Coras3, Nathanael Spann1, Anyan Cheng4, Thomas Prohaska1, Babak Razani5, Robert Terkeltaub1, Benjamin Ebert6, Ru Liu Bryan7, Monica Guma8 and Christopher glass1, 1University of California San Diego, San Diego, CA, 2Department of Medicine, University of California San Diego, La Jolla, CA, 3Cedars-Sinai Medical Center, Los Angeles, CA, 4University of California San Diego, San Francisco, CA, 5Universit of Pittsburgh, Pittsburgh, PA, 6Dana-Farber Cancer Institute, Boston, MA, 7UCSD and VASDHS, San Diego, CA, 8San Diego VA Healthcare Service, La Jolla, CA

    Background/Purpose: Gout is the most common form of inflammatory arthritis worldwide, which is characterised by the deposition of monosodium urate crystals (MSUc) in the joints…
  • Abstract Number: 2504 • ACR Convergence 2023

    The Effect of Inflammatory Conditions on the Regulation of Canonical and Non-canonical NF-kB Pathways via Bcl11b

    Sara Parsa1, Saeid Rahmani2, Nadine Davelaar1, Adriana M.C.mus1 and Erik Lubberts1, 1Erasmus Medical Center, Rotterdam, Netherlands, 2Institute for Research in Fundamental Sciences, Tehran, Iran

    Background/Purpose: Bcl11b, a zinc finger bi-functional transcription factor, is highly expressed in various tissues during development and differentiation, including stromal cells. It has been shown…
  • Abstract Number: 0039.5 • ACR Convergence 2023

    Cytokine-induced Transcriptome Modification Elucidates the Similarity and Dissimilarity Across 10 Immune-related Diseases

    Haruka Takahashi1, Hiroaki Hatano2, Masahiro Nakano3, Haruka Tsuchiya4, Mineto Ota4, Tomohisa Okamura5, Keishi Fujio4 and Kazuyoshi Ishigaki6, 1Laboratory for Human Immunogenetics, RIKEN Center for Integrative Medical Sciences and Department of Allergy and Rheumatology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan, 2Laboratory for Human Immunogenetics, RIKEN Center for Integrative Medical Sciences, Tokyo, Japan, 3Laboratory for Autoimmune Diseases, RIKEN Center for Integrative Medical Sciences, Tokyo, Japan, 4Department of Allergy and Rheumatology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan, 5Department of Allergy and Rheumatology, Graduate School of Medicine, The University of Tokyo and Department of Functional Genomics and Immunological Diseases, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan, 6RIKEN, Tokyo, Japan

    Background/Purpose: Abnormal cytokine regulation is the fundamental pathology of immune-mediated diseases (IMDs). Clinical transcriptome data has a potential to monitor real-time cytokine pathway activities of…
  • Abstract Number: 1668 • ACR Convergence 2023

    Cell Specific Molecular Profiling of Scleroderma Associated Interstitial Lung Disease Subtypes

    Monica Yang1, Fred Deiter1, Emily Flynn1, Jessica Neely1, Seoyeon Lee2, John Greenland1, Marina Sirota3 and Paul Wolters1, 1University of California San Francisco, San Francisco, CA, 2Yale University School of Medicine, New Haven, CT, 3Bakar Computational Health Sciences Institute, University of California San Francisco, San Francisco, CA

    Background/Purpose: Interstitial lung disease (ILD) is present in up to 90% of patients with systemic sclerosis (SSc) and the leading cause of SSc-related mortality. SSc-ILD…
  • Abstract Number: 016 • 2023 Pediatric Rheumatology Symposium

    Gene Expression Changes in Polyarticular Juvenile Idiopathic Arthritis Following Tofacitinib Treatment

    Esraa Eloseily1, Alex Pickering2, Sanjeev Dhakal3, Alexei Grom3, Hermine Brunner3 and Sherry Thornton4, 1Division of Pediatric Rheumatology, Cincinnati Children's Hospital Medical Center, Cincinnti, OH, 2Department of Biomedical Informatics, Harvard Medical School, Boston, MA, 3Cincinnati Children's Hospital Medical Center, Cincinnati, OH, 4Cincinnati Children's Hospital, Cincinnati, OH

    Background/Purpose: Despite advances in the understanding of juvenile idiopathic arthritis (JIA) pathophysiology, personalized treatments informed by gene transcriptomic profiles remain elusive. We aimed toexamine the…
  • Abstract Number: 081 • 2023 Pediatric Rheumatology Symposium

    Predicting Extension in Juvenile Idiopathic Arthritis

    Megan Simonds1, Kathleen Sullivan2 and AnneMarie Brescia1, 1Nemours Children's Health, Wilmington, DE, 2Children's Hospital of Philadelphia, Philadelphia, PA

    Background/Purpose: Juvenile idiopathic arthritis (JIA) is the most common rheumatic disease of childhood and carries a risk of permanent joint damage and disability [1]. In…
  • Abstract Number: L04 • ACR Convergence 2022

    Psoriatic Arthritis Disease Subtypes Mediated by CD8 T Cells Are Phenocopied in a Novel Humanized Murine Model of Psoriasis and Arthritis

    Maria de la Luz Garcia-Hernandez1, Javier Rangel-Moreno1, Ananta Paine2, Soumyaroop Bhattacharya3, Jeffrey Fox4, Ernest Meyer5, Brian Isett5, Riyue Bao6, Tullia Bruno6 and Christopher Ritchlin7, 1University of Rochester, Rochester, NY, 2ORNA Tx, Southborough, MA, 3Department of Pediatrics, University of Rochester Medical Center, Rochester, NY, 4CMSR, University of Rochester Medical Center, Rochester, NY, 5UPMC Hillman Cancer Center, Pittsburgh, PA, 6University of Pittsburgh, Pittsburgh, PA, 7University of Rochester Medical Center, Rochester, NY

    Background/Purpose: A pivotal clinical characteristic of psoriatic arthritis (PsA) is disease manifestations in several domains (skin, entheses, joints, spine) and multiple domain involvement is prevalent,…
  • Abstract Number: 0594 • ACR Convergence 2022

    Identification of Peptidylglycine Alpha-Amidating Monooxygenase as a Regulator of Tissue Damage Mediated by Rheumatoid Arthritis Synovial Fibroblasts

    Kevin Sheridan1, Emma Dorris1, Christopher Buckley2 and Anthony Wilson1, 1University College Dublin, Dublin, Ireland, 2University of Oxford, Oxford, United Kingdom

    Background/Purpose: The minor C allele variant of rs26232 SNP, located within the first intron of the Macrophage Immunometabolism regulator (MACIR) gene, is associated with both…
  • Abstract Number: 1136 • ACR Convergence 2022

    Stratification of Systemic Lupus Erythematosus (SLE) Patients Based on the Molecular Patterns of Mouse Models

    Maria Rivas Torrubia, Maria Morell, Marta Alarcon-Riquelme and Guillermo Barturen, Center for Genomics and Oncological Research (GENYO), Granada, Spain

    Background/Purpose: Systemic lupus erythematosus (SLE) is an autoimmune, chronic and multisystemic autoimmune disorder, which typically affects women and presents high severity and mortality. It is…
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All abstracts accepted to ACR Convergence are under media embargo once the ACR has notified presenters of their abstract’s acceptance. They may be presented at other meetings or published as manuscripts after this time but should not be discussed in non-scholarly venues or outlets. The following embargo policies are strictly enforced by the ACR.

Accepted abstracts are made available to the public online in advance of the meeting and are published in a special online supplement of our scientific journal, Arthritis & Rheumatology. Information contained in those abstracts may not be released until the abstracts appear online. In an exception to the media embargo, academic institutions, private organizations, and companies with products whose value may be influenced by information contained in an abstract may issue a press release to coincide with the availability of an ACR abstract on the ACR website. However, the ACR continues to require that information that goes beyond that contained in the abstract (e.g., discussion of the abstract done as part of editorial news coverage) is under media embargo until 10:00 AM ET on November 14, 2024. Journalists with access to embargoed information cannot release articles or editorial news coverage before this time. Editorial news coverage is considered original articles/videos developed by employed journalists to report facts, commentary, and subject matter expert quotes in a narrative form using a variety of sources (e.g., research, announcements, press releases, events, etc.).

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