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Abstracts tagged "Genomics and Proteomics"

  • Abstract Number: 2643 • ACR Convergence 2024

    Integrated Bulk and Single Cell RNA Sequencing Defines Key Pathways Regulating Myofibroblast Differentiation Across ANA Subgroups in Diffuse Systemic Sclerosis

    Kristina Clark1, Corrado Campochiaro2, Emma Derrett-Smith3, Voon Ong4, Christopher Buckley5 and Christopher Denton6, 1University of Oxford, Oxford, United Kingdom, 2IRCCS San Raffaele Hospital. Vita-Salute San Raffaele University, Milan, Milan, Italy, 3University College London Division of Medicine, Birmingham, United Kingdom, 4University College London, London, England, United Kingdom, 5Kennedy Institute of Rheumatology, University of Oxford, Oxford, United Kingdom, 6University College London, Northwood, United Kingdom

    Background/Purpose: Myofibroblasts are key cells in the pathogenesis of systemic sclerosis (SSc).  TGFβ is a key growth factor driving myofibroblast formation in SSc.  The main…
  • Abstract Number: 0778 • ACR Convergence 2024

    Comprehensive Immune Profiling of Anti-CD19 Chimeric Antigen Receptor T-Cell Therapy in Patients with Autoimmune Disease

    Justin Chou1, Ricardo Grieshaber-Bouyer2, Michelle J Wu3, Christina Bergmann2, Jule Taubmann4, Fabian Müller5, Aline Bozec4, Tobias Rothe2, Andreas MAckensen6, Amber Podoll7, Jonathan Gutman7, Aiden Haghikia8, Dimitrios Mougiakakos9, Gary Tong3, Pouya Kheradpour3, Francis Kim10, Prameela Ramesan10, Brandon Kwong10, Kunbin Qu10, Bishwa Ganguly10, Dominic Borie10, James Chung10 and Georg Schett11, 1Kyverna Therapeutics, Emeryville, CA, 2Department of Medicine 3 - Rheumatology and Immunology, Friedrich-Alexander-Universität (FAU) Erlangen-Nürnberg and Uniklinikum Erlangen, Erlangen, Germany, 3Verily Life Sciences, South San Francisco, CA, 4Friedrich-Alexander Universität Erlangen-Nürnberg and Universitätsklinikum Erlangen, Erlangen, Germany, 5Department of Medicine 5 - Hematology and Oncology, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) and Uniklinikum Erlangen, Erlangen, Germany, 6Department of Medicine 5 - Hematology and Oncology, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU) and Uniklinikum Erlangen, Erlangen, Bayern, Germany, 7University of Colorado Anschutz Medical Campus, Aurora, CO, 8Otto-von-Guericke University, Magdeburg, Germany, 9Otto-von-Guericke University, Magdeburg, Germany, Magdeburg, Germany, 10Kyverna Therapeutics, Inc., Emeryville, CA, 11Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany

    Background/Purpose: Anti-CD19 chimeric antigen receptor (CAR) T-cell therapy represents a promising advancement in the treatment of autoimmune diseases, including systemic sclerosis (SSc), idiopathic inflammatory myopathy…
  • Abstract Number: 0892 • ACR Convergence 2024

    Peptides from Candidate Sjögren’s Disease Autoantigens and Salivary Gland Tissue-Enriched Proteins Eluted from Human Salivary Gland HLA-DR

    Tommi C. Taylor1, Sri Ramarathinam2, Shan Zou Chung2, Kirti Pandey2, Ananth Aditya Jupudi1, Bhuwan Khatri3, Sherri Longobardi3, Charmaine Lopez-Davis3, Astrid Rasmussen3, Kiely Grundahl3, Robert Hal Scofield3, Christopher Lessard3, Linda F. Thompson3, Anthony W. Purcell2 and A. Darise Farris3, 1University of Oklahoma Health Sciences Center, Oklahoma City, OK, 2Monash University, Clayton, Victoria, Australia, 3Oklahoma Medical Research Foundation, Oklahoma City, OK

    Background/Purpose: Sjögren’s Disease (SjD) is characterized by aberrant autoimmune reactions in lacrimal and salivary glands (SG) leading to severe dryness. Evidence for B cell help…
  • Abstract Number: 0893 • ACR Convergence 2024

    Uncovering Common and Distinctive Molecular Profiles Between Early and Stablished Rheumatoid Arthritis Through Integrative Multi-omics Analysis and Its Association with Disease Status and Clinical Response

    Ismael Sánchez Pareja1, Carlos Perez-Sanchez1, Dani Toro-Domínguez2, Laura Muñoz-Barrera1, Tomás Cerdó1, Elena Moreno-Caño3, Rafaela Ortega-Castro4, Jerusalem Calvo Gutierrez5, María Lourdes Ladehesa-Pineda6, Concepción Aranda-Valera3, María Carmen Ábalos-Aguilera7, Christian Merlo-Ruiz7, Mª Angeles Aguirre-Zamorano8, Nuria Barbarroja1, Marta Alarcon-Riquelme9, Alejandro Escudero-Contreras1 and Chary Lopez-Pedrera6, 1IMIBIC/Reina Sofia Hospital/University of Cordoba, Cordoba, Spain, 2Fundación Progreso y Salud, Andalusian Government, Granada, 3IMIBIC/Reina Sofia Hospital/University of Cordoba, Córdoba, Andalucia, Spain, 4Hospital Reina Sofía, Cordoba, Andalucia, Spain, 5HU Reina Sofia, Cordoba, Spain, 6IMIBIC/Reina Sofia Hospital/University of Cordoba, Cordoba, Andalucia, Spain, 7IMIBIC/Reina Sofia Hospital/University of Cordoba, CÓRDOBA, Spain, 8IMIBIC/Reina Sofia Hospital/University of Cordoba, CÓRDOBA, Andalucia, Spain, 9Fundación Progreso y Salud, Andalusian Government, Granada, Spain

    Background/Purpose: Characterize the molecular landscape of RA patients using a multi-omic approach encompassing transcriptomics and proteomics and assess its association with disease stage and therapeutic…
  • Abstract Number: 0946 • ACR Convergence 2024

    Tissue Resident Monocyte-lineage Cells (TR-MC) Exist as Two Different Subpopulations

    Yidan Wang1, Jessica Maciuch2, Tyler Therron3, Carla Cuda2, Deborah Winter4 and Harris Perlman2, 1Northwestern University, Hanover Park, IL, 2Northwestern University, Chicago, IL, 3Northwestern University, Chicago, 4Northwestern University, Skokie, IL

    Background/Purpose: Monocytes are critical for the pathogenesis of rheumatoid arthritis (RA). However, depletion of peripheral monocytes (PM) is not sufficient to rescue disease in RA…
  • Abstract Number: 1589 • ACR Convergence 2024

    Whole Skin Gene Expression Analysis Identifies Discrete Modules That Differentiate Antinuclear Antibody Subsets in Systemic Sclerosis

    Kristina Clark1, Corrado Campochiaro2, Philip Yee3, Emma Derrett-Smith4, Voon Ong5 and Christopher Denton6, 1University of Oxford, Oxford, United Kingdom, 2IRCCS San Raffaele Hospital. Vita-Salute San Raffaele University, Milan, Milan, Italy, 3UCL, London, United Kingdom, 4University College London Division of Medicine, Birmingham, United Kingdom, 5University College London, London, England, United Kingdom, 6University College London, Northwood, United Kingdom

    Background/Purpose: Hallmark autoantibody reactivities predict different patterns of skin involvement and risk of internal organ involvement.  We have asked whether whole skin gene expression may…
  • Abstract Number: 1660 • ACR Convergence 2024

    Systemic Inflammation and Transcriptional Reprogramming Contribute to Progression to Active Rheumatoid Arthritis in ACPA+ Individuals

    Mark Gillespie1, Ziyuan He1, Adam Savage1, Pravina Venkatesan1, Marla Glass1, Lauren Okada2, Nhung Tran2, Yudong He2, Samir Rachid Zaim1, Padmapriyadarshini Ravisankar2, Christy Bennett1, Julian Reading2, Jessica Garber2, Palak Genge2, Veronica Hernandez2, Alexander Heubeck2, Erin Kawelo2, Upaasana Krishnan2, Kevin Lee2, Regina Mettey2, Blessing Musgrove2, Vaishnavi Parthasarathy2, Cole Phalen2, Charles Roll2, Tyanna Stuckey2, Morgan Weiss1, Claire Gustafson2, Qiuyu Gong2, Emma Kuan2, Tao Peng2, Lucas Graybuck2, Kristen Demoruelle3, Kristine Kuhn4, David Boyle5, Fan Zhang4, Thomas Bumol6, Ananda Goldrath2, Xiaojun Li1, V. Michael Holers7, Peter Skene1, Gary Firestein8, Kevin Deane9 and Troy Torgerson10, 1Allen Institute for Immunology, Seattle, WA, 2Allen Institute for Immunology, Seattle, 3University of Colorado Anschutz Medical Campus, Golden, CO, 4University of Colorado, Aurora, CO, 5UCSD, La Jolla, CA, 6Allen Institute for Immunology, San Diego, CA, 7University of Colorado, Denver, CO, 8University of California, San Diego, San Diego, CA, 9University of Colorado Denver Anschutz Medical Campus, Aurora, CO, 10Allen Institute for Immunology, Enumclaw, WA

    Background/Purpose: Elevated levels of RA-associated autoantibodies (ACPA, RF) prior to the clinical onset of inflammatory arthritis (IA) define a state of risk for future development…
  • Abstract Number: 1762 • ACR Convergence 2024

    Multi-omic Analysis Defines Heterogeneous and Cell Specific Type I Interferon Signalling in Juvenile-onset SLE Patients Associated with Biomarkers of Cardiovascular Risk

    Junjie Peng, Thomas McDonnell, Elizabeth Jury, Coziana Ciurtin and George Robinson, University College London, London, United Kingdom

    Background/Purpose: Juvenile-onset systemic lupus erythematosus (jSLE) is an autoimmune disease characterised by chronic inflammation, multi-organ damage, and/or death. Despite their young age, jSLE patients have…
  • Abstract Number: 0874 • ACR Convergence 2023

    RNA-Binding Proteins That Are Highly Expressed and Enriched in Healthy Cartilage but Suppressed in Osteoarthritis

    Hannah Swahn, Merissa Olmer and Martin K Lotz, Scripps Research Institute, La Jolla, CA

    Background/Purpose: RNA-binding proteins (RBPs) have diverse and essential biological functions, but their role in cartilage health and disease is largely unknown. The objectives of this…
  • Abstract Number: 1595 • ACR Convergence 2023

    Pharmacological Modulation of Krüppel-like Factor 4 Reduces the Severity of Experimental Osteoarthritis via Tissue Protection and Regeneration

    Manabu Kawata1, Merissa Olmer2, Kristen Johnson3 and Martin K Lotz2, 1Scripps Research Institute, San Diego, CA, 2Scripps Research Institute, La Jolla, CA, 3CALIBR, La Jolla, CA

    Background/Purpose: Krüppel-like factors (KLFs) are members of the zinc finger family of transcription factors, which includes 17 members in mammals. We found that expression of…
  • Abstract Number: 1644 • ACR Convergence 2023

    The EISER Study: Identifying Microbial Factors Associated with Subclinical Gut Inflammation in Spondyloarthritis Patients

    Alba Boix-Amorós1, Rebecca Blank2, Adam Cantor1, Jesus Sanz3, Ana Gutiérrez-Casbas4, Jordi Gratacos Masmitja5, Iago Rodríguez -Lago6, Elisa Trujillo7, Ignacio Marin-Jimenez8, Zulema Plaza9, Marta Domínguez10, Jose Federico Diaz-Gonzalez11, Juan D Canete12, Jose Scher13 and Jose Clemente1, 1Icahn School of Medicine, New York, NY, 2New York University, New York, NY, 3Hospital Universitario Puerta de Hierro, Majadahonda, Spain, 4Hospital General Universitario Dr. Balmis, Alicante, Spain, 5University Hospital Parc Taulí, Sabadell, Spain, 6Gastroenterology department Hospital Galdakao, Galdakao, Spain, 7Hospital Universitario de Canarias, Santa Cruz de Tenerife, Spain, 8Public Health System, Madrid, Spain, 9Universidad Autónoma de Madrid, Madrid, Spain, 10Sociedad Española de Reumatología, Madrid, Spain, 11Hospital Universitario de Canarias, La Laguna, Spain, 12Hospital Clinic an IDIBAPS, Barcelona, Spain, 13New York University School of Medicine, New York, NY

    Background/Purpose: Nearly 8% of patients with spondyloarthritis (SpA) manifest symptoms that are compatible with active inflammatory bowel disease (IBD), despite not having any previous diagnosis…
  • Abstract Number: 1657 • ACR Convergence 2023

    Mapping the Network of Coordinated Immune Dysregulation in Juvenile Dermatomyositis at Single-cell Resolution

    Gabrielle Rabadam1, Camilla Wibrand2, Emily Flynn1, George Hartoularos1, Yang Sun1, Susan Kim3, Chun Jimmie Ye1, Zev Gartner1, Marina Sirota4 and Jessica Neely1, 1University of California San Francisco, San Francisco, CA, 2Aarhus University, Aarhus, Denmark, and University of California San Francisco, San Francisco, CA, 3UCSF Benioff Children's Hospital, San Francisco, CA, 4Bakar Computational Health Sciences Institute, University of California San Francisco, San Francisco, CA

    Background/Purpose: Juvenile Dermatomyositis (JDM) is a rare multisystem autoimmune condition that involves complex immune responses in both innate and adaptive compartments. Currently, we have a…
  • Abstract Number: 1661 • ACR Convergence 2023

    Spatial Transcriptional Alterations in the Cellular Landscape of Pediatric Scleroderma Skin

    Kathryn Torok1, Ying-Ju Lai2, Zhongli Xu3, Anwesha Sanyal3, Giffin Werner3, Theresa Hutchins3, Claire Cheng3 and Wei Chen3, 1University of Pittsburgh, University of Pittsburgh Medical Center, Pittsburgh, PA, 2University of Pittbsurgh, Pittsburgh, PA, 3University of Pittsburgh, Pittsburgh, PA

    Background/Purpose: Recent single-cell RNA sequencing (scRNA seq) data has been generated across several tissues in autoimmune diseases, helping to understand the cellular and molecular underpinnings…
  • Abstract Number: 1762 • ACR Convergence 2023

    Single-cell RNA Sequencing Analysis and Immune Profiling of Antigen-specific T Cells in Patients with Rheumatoid Arthritis and Healthy Controls

    JING SONG1, Cliff Rims1, Matthew Dufort1, Peter Linsley1, Eddie James2 and Jane Buckner2, 1Benaroya Research Institute, Seattle, WA, 2Benaroya Research Institute at Virginia Mason, Seattle, WA

    Background/Purpose: Single-cell analysis has emerged as a powerful tool for investigating the transcriptomics and T-cell receptor (TCR) diversity in patients with rheumatoid arthritis (RA). However,…
  • Abstract Number: 2342 • ACR Convergence 2023

    Modulation of B Cell and Interferon Pathways by Ianalumab in Patients with Systemic Lupus Erythematosus: Findings from a Phase 2 Clinical Trial

    Aida Santos da Costa1, Thomas Dörner2, Andrea Grioni1, Alexandre Avrameas1, Ulrike Sommer1, Rainer Hillenbrand1, Valeria De Luca1, Enrico Ferrero1, Andre Nogueira da Costa1, Isabelle Isnardi1 and Stephen J Oliver1, 1Novartis Pharma AG, Basel, Switzerland, 2Department of Medicine, Rheumatology and Clinical Immunology, Charité Universitätsmedizin and Deutsches Rheumaforschungszentrum, Berlin, Germany

    Background/Purpose: Ianalumab (VAY736) is an afucosylated monoclonal antibody targeting the B cell activating factor receptor (BAFFR) that depletes B cells via enhanced antibody dependent cellular…
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All abstracts accepted to ACR Convergence are under media embargo once the ACR has notified presenters of their abstract’s acceptance. They may be presented at other meetings or published as manuscripts after this time but should not be discussed in non-scholarly venues or outlets. The following embargo policies are strictly enforced by the ACR.

Accepted abstracts are made available to the public online in advance of the meeting and are published in a special online supplement of our scientific journal, Arthritis & Rheumatology. Information contained in those abstracts may not be released until the abstracts appear online. In an exception to the media embargo, academic institutions, private organizations, and companies with products whose value may be influenced by information contained in an abstract may issue a press release to coincide with the availability of an ACR abstract on the ACR website. However, the ACR continues to require that information that goes beyond that contained in the abstract (e.g., discussion of the abstract done as part of editorial news coverage) is under media embargo until 10:00 AM CT on October 25. Journalists with access to embargoed information cannot release articles or editorial news coverage before this time. Editorial news coverage is considered original articles/videos developed by employed journalists to report facts, commentary, and subject matter expert quotes in a narrative form using a variety of sources (e.g., research, announcements, press releases, events, etc.).

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