Session Information
Session Type: ACR Poster Session B
Session Time: 9:00AM-11:00AM
Background/Purpose: HLA-class II region harbors the strongest genetic factors for ANCA-associated vasculitis (AAV), and differences in the genetic background of HLA-class II may partly explain the epidemiologic differences in AAV between European and Asian populations. HLA-DPB1*04:01, highly prevalent in the European populations, is associated with granulomatosis with polyangiitis (GPA)/PR3-AAV prevalent in the European populations, whereas DRB1*09:01, almost exclusively distributed in Asian populations, is associated with microscopic polyangiitis (MPA)/MPO-AAV, which account for the majority of AAV in Japan. Of interest, although DRB1*09:01 is very rare in the European populations, genome-wide association study (GWAS) detected significant association of a single nucleotide polymorphism (SNP) rs5000634 between DQB1 and DQA2 loci with MPA/MPO-AAV. Whether this association is independent from HLA alleles has not been reported. Another unique feature in Japanese AAV is that only half of the patients with GPA are positive for PR3-ANCA, and the other half are positive for MPO-ANCA. This provides a valuable opportunity to distinguish whether the genetic factors are associated with clinical classification of GPA or ANCA specificity. In the present study, we addressed these two issues in Japanese patients with AAV.
Methods: HLA-DRB1 and DPB1 were genotyped using high-resolution allele typing, and rs5000634 using TaqMan SNP assay. Association was tested in 467 Japanese AAV patients (clinical classification: MPA [285], GPA [92], eosinophilic GPA [56], unclassifiable [34], ANCA specificity: MPO-AAV [376], PR3-AAV [62]) and 596 healthy controls. Among GPA, 36 were single positive for PR3-ANCA (PR3-GPA) and 35 were single positive for MPO-ANCA (MPO-GPA).
Results: As shown in Table 1, rs5000634A was slightly decreased in MPO-AAV and MPA. However, when conditioned on DRB1*09:01 or DRB1*13:02, the association was no longer significant, while the association of DRB1 alleles remained significant after conditioned on rs5000634. When the associations of DRB1 and DPB1 were examined in MPO-GPA and PR3-GPA (Table 2), DPB1*04:01 was associated with PR3-GPA, but slightly decreased in MPO-GPA. In contrast, association of DRB1*08:02 was observed in MPO-GPA, but not in PR3-GPA.
Conclusion: In Japanese AAV, the genetic contribution of HLA-DQ region GWAS SNP was the secondary one caused by linkage disequilibrium with HLA-DRB1 alleles. Striking differences in HLA-DRB1 and DPB1 associations were observed between MPO-GPA and PR3-GPA, suggesting that HLA may be more strongly associated with ANCA specificity than with clinical classification of GPA.
Table 1. The association of European GWAS SNP rs5000634 with MPA/MPO-AAV was secondary to DRB1 association in the Japanese population. |
||||||||
unconditioned |
Conditioned on DRB1*09:01 |
Conditioned on DRB1*13:02 |
Conditioned on rs5000634 |
|||||
P |
OR (95%CI) |
P |
OR (95%CI) |
P |
OR (95%CI) |
P |
OR (95%CI) |
|
MPO-AAV |
|
|
|
|
|
|
|
|
DRB1*09:01 |
1.6E-04 |
1.58 (1.25-2.00) |
– |
– |
– |
– |
1.6E-03 |
1.53 (1.18-1.99) |
DRB1*13:02 |
7.0E-05 |
0.43 (0.28-0.65) |
– |
– |
– |
– |
3.9E-04 |
0.46 (0.30-0.70) |
rs5000634 |
0.044 |
0.82 (0.68-1.00) |
0.64 |
0.95 (0.77-1.17) |
0.33 |
0.91 (0.75-1.10) |
– |
– |
MPA |
|
|
|
|
|
|
||
DRB1*09:01 |
6.4E-04 |
1.56 (1.21-2.02) |
– |
– |
– |
– |
4.2E-03 |
1.52 (1.14-2.01) |
DRB1*13:02 |
1.1E-03 |
0.47 (0.30-0.74) |
– |
– |
– |
– |
3.9E-03 |
0.50 (0.32-0.80) |
rs5000634 |
0.074 |
0.83 (0.68-1.02) |
0.67 |
0.95 (0.76-1.19) |
0.35 |
0.90 (0.73-1.11) |
– |
– |
Conditional logistic regression analysis was performed under the additive model. OR: odds ratio, CI: confidence interval. |
Table 2. Differential association of DRB1*08:02, DRB1*13:02 and DPB1*04:01 with PR3-ANCA single positive GPA and MPO-ANCA single positive GPA. |
|||||||
|
PR3-GPA |
MPO-GPA |
Controls |
||||
|
AF (%) |
P |
OR(95%CI) |
AF (%) |
P |
OR(95%CI) |
AF (%) |
DRB1*08:02 |
1.4 |
0.72 |
0.49 (0.07-3.67) |
11.4 |
1.3E-03 |
4.53 (2.01-10.22) |
2.8 |
DRB1*13:02 |
8.3 |
1.0 |
0.93 (0.39-2.20) |
1.4 |
0.025 |
0.15 (0.02-1.08) |
8.9 |
DPB1*04:01 |
13.9 |
0.025 |
2.39 (1.18-4.85) |
1.4 |
0.12 |
0.21 (0.03-1.57) |
6.3 |
AF: allele frequency, PR3-GPA: PR3-ANCA positive, MPO-ANCA negative GPA, MPO-GPA: MPO-ANCA positive, PR3-ANCA negative GPA, OR: odds ratio, CI: confidence interval. P values were calculated by Fishers exact test. |
To cite this abstract in AMA style:
Kawasaki A, Hirano F, Sada KE, Kobayashi S, Yamada H, Furukawa H, Nagasaka K, Sugihara T, Yamagata K, Sumida T, Tohma S, Ozaki S, Matsuo S, Hashimoto H, Makino H, Arimura Y, Harigai M, Tsuchiya N. HLA-Class II Associations with ANCA-Associated Vasculitis in the Japanese Population: Different Features from European Populations [abstract]. Arthritis Rheumatol. 2017; 69 (suppl 10). https://acrabstracts.org/abstract/hla-class-ii-associations-with-anca-associated-vasculitis-in-the-japanese-population-different-features-from-european-populations/. Accessed .« Back to 2017 ACR/ARHP Annual Meeting
ACR Meeting Abstracts - https://acrabstracts.org/abstract/hla-class-ii-associations-with-anca-associated-vasculitis-in-the-japanese-population-different-features-from-european-populations/